PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_009408
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family TCP
Protein Properties Length: 313aa    MW: 33090.4 Da    PI: 4.8422
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_009408genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1134.1e-3582166494
          TCP   4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksa 94 
                   ++ ++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+p+i+++tgt++++a ++      + +++ +++  ++++
  DCAR_009408  82 SRRVSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLERAEPEIIKATGTGTIPAIAV------NVNGTLKIPTTSPAT 166
                  67899*********************************************************99999544......222222233222222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136926.11986140IPR017887Transcription factor TCP subgroup
PfamPF036349.2E-2986160IPR005333Transcription factor, TCP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0031347Biological Processregulation of defense response
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MASSSIEHNK NLQGVEEEED EVDQIQSDPL IGDPALYSIS AVDGVVSPLA VVPVPKQEPP  60
ENEVGRSLVV PVQERTVAAQ TSRRVSKDRH TKVEGRGRRI RMPATCAARI FQLTRELGHK  120
SDGETIRWLL ERAEPEIIKA TGTGTIPAIA VNVNGTLKIP TTSPATEGDA KKRKRPCNSE  180
FIDVSEENGS VSIASSFAPV APIMPAMWGP TGVVGSSGFP GGAFFMVPPG MGGGLNQAQL  240
WAFPAGATPV FNVTGRPVSD YVSMQPVAMM SESASCSTMA AGSMEIYDKR ELQFMAGCST  300
SSADEKQPSS DS*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00667PBMTransfer from GSVIVG01027588001Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017238815.10.0PREDICTED: transcription factor TCP19-like
SwissprotQ9LT893e-66TCP19_ARATH; Transcription factor TCP19
TrEMBLA0A166A2800.0A0A166A280_DAUCS; Uncharacterized protein
STRINGPGSC0003DMT4000623278e-91(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24824201
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.23e-68TCP family protein