PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_010801
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 192aa    MW: 22439.2 Da    PI: 10.0213
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_010801genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1383.5e-1288130547
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                  ++ rr+ +NRe+ArrsR RK++ +++L+++v  L+ eN+++ +
  DCAR_010801  88 RKRRRMVSNRESARRSRMRKQKHLDNLRNRVNRLKIENQDMLN 130
                  5779999*******************************99874 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.3E-1184148IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.4E-1086128No hitNo description
PROSITE profilePS5021710.38186149IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.16E-1088136No hitNo description
PfamPF001701.4E-988145IPR004827Basic-leucine zipper domain
CDDcd147028.18E-1889138No hitNo description
PROSITE patternPS00036091106IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MLVSEGVFET LFPEFEGGFT PWNDQEPTFF LDHQDQGSVF SPTPLQEPVF SNSGSDNSDR  60
SISGSVVTNK KRDSPDSVLN HLPVIDERKR RRMVSNRESA RRSRMRKQKH LDNLRNRVNR  120
LKIENQDMLN GLRWVAHHSQ LVRTENERLR SESHMLRQKM RDMHQLLLAR HIQEQLFSVA  180
WPCNNVTHIN E*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16991KKRDSPDSVLNHLPVIDERKRRR
28791RKRRR
387108RKRRRMVSNRESARRSRMRKQK
4100107RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017240582.11e-139PREDICTED: basic leucine zipper 43
TrEMBLA0A161XZ391e-138A0A161XZ39_DAUCS; Uncharacterized protein
STRINGEOX917515e-52(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28202251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.21e-28basic leucine-zipper 6