PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_010997

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

bZIP

Protein Properties

Length: 163aa MW: 19106.3 Da PI: 5.2848

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_010997	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.8	1.5e-15	85	143	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +++rr+++NRe+ArrsR RK+++++eL v L +eN+ L+++l++ +++ ++ +e+ DCAR_010997 85 RKQRRMISNRESARRSRMRKQKQLDELWSQVVWLRNENQHLIEKLNKFSEQHDQALQEN 143 689***********************************************999988887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.1E-12	81	145	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.795	83	146	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.55E-12	85	135	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.6E-12	85	158	No hit	No description
Pfam	PF00170	1.2E-13	85	143	IPR004827	Basic-leucine zipper domain
CDD	cd14702	1.48E-18	86	137	No hit	No description
PROSITE pattern	PS00036	0	88	103	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence Send to blast
MQTSEMAELH YLVPPDPITL LPSTFSCSQN NTPTFDQFTR FSNPLLYDLQ TNPQLQSFNP 60 QPTSFSSNST SDEADEKQIC LINERKQRRM ISNRESARRS RMRKQKQLDE LWSQVVWLRN 120 ENQHLIEKLN KFSEQHDQAL QENAQLKDET SELRQMLSDM QL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	104	RRSRMRKQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017240946.1	1e-115	PREDICTED: basic leucine zipper 43-like
TrEMBL	A0A162AK44	1e-114	A0A162AK44_DAUCS; Uncharacterized protein
STRING	VIT_14s0083g00700.t01	6e-66	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA947	24	92

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	5e-47	basic leucine-zipper 42

Link Out ? help Back to Top
Phytozome	DCAR_010997