PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_011934
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 252aa    MW: 27552.1 Da    PI: 4.3406
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_011934genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.2e-184696155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++y+GVr +  +g+Wv+eIr p++   r r++lg+f++ae+Aa+a +aa  +l+g
  DCAR_011934 46 CKYRGVRKRN-WGKWVSEIRMPNS---RERIWLGSFDSAEKAARAFDAALYCLRG 96
                 79*****887.**********933...5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.91E-2946106No hitNo description
PfamPF008471.4E-104696IPR001471AP2/ERF domain
PROSITE profilePS5103222.27347104IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-2047104IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.6E-3047105IPR001471AP2/ERF domain
SMARTSM003802.6E-3347110IPR001471AP2/ERF domain
PRINTSPR003673.2E-104859IPR001471AP2/ERF domain
PRINTSPR003673.2E-107086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MTDKAREYSS TTPSCGTSEA HKYNHLLAPV KSSEAEKNSA TSSSSCKYRG VRKRNWGKWV  60
SEIRMPNSRE RIWLGSFDSA EKAARAFDAA LYCLRGPNAN FNFPNTPPEI PGGRSLTPAE  120
IQAAATQFAN SGEPSLNNCA PGLPEAESAS PSPSPSPSQS QSQSPTYGAT DLNMNMNMNM  180
DGTETSVFDQ YSTMGPGWTE NGVPDFGIFP GFDDLSNEFY MPSQLNNGAD YQDVEEQCEY  240
TTYQESFLWN F*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1740105773Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00151DAPTransfer from AT1G19210Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017241001.10.0PREDICTED: ethylene-responsive transcription factor ERF017-like
TrEMBLA0A166C1Z00.0A0A166C1Z0_DAUCS; Uncharacterized protein
STRINGXP_010099089.18e-68(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19392466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.14e-42ERF family protein