PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_012697

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

NAC

Protein Properties

Length: 201aa MW: 22913.9 Da PI: 4.3213

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_012697	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	69.7	7.7e-22	21	144	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppG+ F P+ +l+ eyL +k+ + ++ +++k +d +++ +P +L+ +++k ++ke y+ +k+++++a++k + +t +g Wk+ ++ ++ + DCAR_012697 21 LPPGYYFLPSAAQLIEEYLLQKILDLPMAS-NIVKIMDFVELiDPDQLNlEEFKYcKDKEGYYITKKAERKANEK-TIIKTLTGHWKEYKSNIPISN- 115 79***********************988.77788887775599854444337889999999999988754.4456788*********99. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 +++ vg k t++fy + +g++t W ++ey+ DCAR_012697 116 NSQIVGYKSTFTFY---QADGTETAWKLNEYT 144 999*******...678889******7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.7E-21	20	174	IPR003441	NAC domain
PROSITE profile	PS51005	24.17	21	174	IPR003441	NAC domain
Pfam	PF02365	5.0E-12	22	144	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence Send to blast
MSNNLPAAAK VIVEEEIGDS LPPGYYFLPS AAQLIEEYLL QKILDLPMAS NIVKIMDFVE 60 LIDPDQLNLE EFKYCKDKEG YYITKKAERK ANEKTIIKTL TGHWKEYKSN IPISNNSQIV 120 GYKSTFTFYQ ADGTETAWKL NEYTSNPDIV PVDALTDTVR AKIEEYVACR IHIKKVKLAE 180 QVIYNEETVK DEDEDEDGEE *

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017240989.1	1e-145	PREDICTED: NAC domain-containing protein 105-like
TrEMBL	A0A166CIK7	1e-144	A0A166CIK7_DAUCS; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15132	6	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33480.1	1e-17	NAC domain containing protein 41

Link Out ? help Back to Top
Phytozome	DCAR_012697