PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_013029
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 202aa    MW: 21498.4 Da    PI: 9.9316
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_013029genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-182574255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 +y+GVr ++ +gr++AeIrdp++   + r++lg+f tae+Aa+a++aa+ +++g
  DCAR_013029 25 HYRGVRKRP-WGRYAAEIRDPYK---KCRVWLGSFHTAEDAARAYDAAAIRFRG 74
                 6********.**********865...69***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.1E-332588IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-212582IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.3E-302582IPR001471AP2/ERF domain
PfamPF008475.1E-112574IPR001471AP2/ERF domain
PROSITE profilePS5103223.1962582IPR001471AP2/ERF domain
CDDcd000183.20E-172584No hitNo description
PRINTSPR003676.1E-102637IPR001471AP2/ERF domain
PRINTSPR003676.1E-104864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MVGPVVQEQV GPKAEQVGPD VEEVHYRGVR KRPWGRYAAE IRDPYKKCRV WLGSFHTAED  60
AARAYDAAAI RFRGARAKTN FAPVRQSPAR SSVENSASGG SVGVHALPRV GVTRRLAAGF  120
PVTTPCHPVV DPRVFCQFVY PPGMMCNVVH PIPNAWRAGG VHGGALSDSG SSSVVDGLHR  180
SSGSTSKELN LELTLAPPSG Y*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-222585565ATERF1
3gcc_A4e-222585565ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017246211.11e-146PREDICTED: ethylene-responsive transcription factor 4
TrEMBLA0A165Z4S91e-144A0A165Z4S9_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.15e-23ERF domain protein 10