PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_013122
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family NAC
Protein Properties Length: 224aa    MW: 24108.2 Da    PI: 8.3108
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_013122genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.92.6e-12128102129
          NAM 102 lkktLvfykgrapkgektdWvmheyrle 129
                  +kktLvfy+grapkgek++Wvmheyrle
  DCAR_013122   1 MKKTLVFYRGRAPKGEKSNWVMHEYRLE 28 
                  8*************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF023656.6E-5127IPR003441NAC domain
PROSITE profilePS5100521.307152IPR003441NAC domain
SuperFamilySSF1019413.01E-15152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MKKTLVFYRG RAPKGEKSNW VMHEYRLEGK FAYHYLSRTS KDEWVISRVF QKTIPGATFP  60
GGKKRLNTTS TNYPELSSSS SVSLPPLLDT LPYNATATSD LDSCSFDGSA STAATKEHVP  120
CFSTSASPSC FNKYSSMFHS VSPAAAMVDP AAAMPPSSLA AFQSNVGVSA FPSLRSLQEN  180
MQLPFFFSPV APSPVFGGGE VGNWPAPDTQ KSGATELDCI WSF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC8472313e-39KC847231.1 Gossypium hirsutum NAC domain protein NAC54 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017246146.11e-162PREDICTED: protein CUP-SHAPED COTYLEDON 2
TrEMBLA0A165Z1X41e-163A0A165Z1X4_DAUCS; Uncharacterized protein
STRINGGLYMA13G34950.12e-66(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.12e-30NAC family protein