PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_013274

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

G2-like

Protein Properties

Length: 404aa MW: 45255.2 Da PI: 6.7976

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_013274	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	35.4	2.3e-11	109	133	2	26
G2-like 2 prlrWtpeLHerFveaveqLGGsek 26 prlrWtp+LH +Fv+ave+LGG+e DCAR_013274 109 PRLRWTPDLHLAFVHAVERLGGQES 133 8*********************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	4.3E-10	105	135	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence Send to blast
MMERNATASC TMDDQRTDIS DQAEILDSKT SPPSSHQRCS FFDLNEAAID DHSESSNENE 60 HKISANTRHD GVDEDEGSAE ASSNNNNTNS EGKEVSGSIV RQYVRSKMPR LRWTPDLHLA 120 FVHAVERLGG QESTNLLLMY RSKKLDESGQ VISRANRLVH GKDEISEMYR RYNPYENLSG 180 HNRSDLLSPL AKSSTFDFRA SSSSRNQKWN FGDHSSLARL WSNDQSSGPV REKMMSSNSL 240 YDHERNAVLV DSGFKGLSRA PHLIKDNVRL NRNGLASCVE DQKLSAIAST QMICSKAMPH 300 YKPALVSAGR ETRSLEFQEL KERQIQHRAS TEVVSQKSVE DKCLPSLQLS LSPNIDNSTE 360 MTHHRIQDRG KAIDTMLSLS LLPDRNKAKL GLSTWDITML NES*

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence Send to blast

MMERNATASC TMDDQRTDIS DQAEILDSKT SPPSSHQRCS FFDLNEAAID DHSESSNENE  60
HKISANTRHD GVDEDEGSAE ASSNNNNTNS EGKEVSGSIV RQYVRSKMPR LRWTPDLHLA  120
FVHAVERLGG QESTNLLLMY RSKKLDESGQ VISRANRLVH GKDEISEMYR RYNPYENLSG  180
HNRSDLLSPL AKSSTFDFRA SSSSRNQKWN FGDHSSLARL WSNDQSSGPV REKMMSSNSL  240
YDHERNAVLV DSGFKGLSRA PHLIKDNVRL NRNGLASCVE DQKLSAIAST QMICSKAMPH  300
YKPALVSAGR ETRSLEFQEL KERQIQHRAS TEVVSQKSVE DKCLPSLQLS LSPNIDNSTE  360
MTHHRIQDRG KAIDTMLSLS LLPDRNKAKL GLSTWDITML NES*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017246544.1	0.0	PREDICTED: uncharacterized protein LOC108218134 isoform X1
TrEMBL	A0A165YXN1	0.0	A0A165YXN1_DAUCS; Uncharacterized protein
STRING	VIT_12s0028g02080.t01	2e-38	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	8e-17	G2-like family protein

Link Out ? help Back to Top
Phytozome	DCAR_013274