PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_014197
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 320aa    MW: 36631.2 Da    PI: 7.1972
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_014197genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.75.6e-15123174155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h ++Er+RR+++N+ ++ Lr+++P++   ++++ +  +i+  A++Y+k+L+
  DCAR_014197 123 QRMTHIAVERNRRRQMNDYLSLLRSMMPPS---YAQRGDQGSIVAGAINYVKELE 174
                  79****************************...*******************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.33E-12121178No hitNo description
PROSITE profilePS5088815.478122173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.05E-16122187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.5E-12123174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-15123190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-8128179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MALETVVFQQ DPFTTAYGCE DFYTTDDSAD AYYKELALQP HFQHKHNIVD HYNINNNLIS  60
PSPSTLQTSL KHSSPNDQND NIFTTDPFFT QAYPHPAKLP TAGSRRKRRR VKASKNKEEV  120
ENQRMTHIAV ERNRRRQMND YLSLLRSMMP PSYAQRGDQG SIVAGAINYV KELEQHLQYM  180
ESEKQKIKKK ETDNKDQSDS LLFDKFFTFP QYSTRPTNNS SHSSSESSAE ADIEVTMVES  240
HANIKVLLKR QPKQLFKMVS GFQSIGLNIL HLNITTIDHR ALFSFNLKVE DDCQLSTVNE  300
IATAVHQMVV MIKEEAIFC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105109RKRRR
2106110KRRRV
3123134RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017244983.10.0PREDICTED: transcription factor bHLH96-like
TrEMBLA0A165XRJ90.0A0A165XRJ9_DAUCS; Uncharacterized protein
STRINGXP_010272971.11e-100(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19962462
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.12e-76bHLH family protein