PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_014240
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family MYB_related
Protein Properties Length: 268aa    MW: 30822.5 Da    PI: 7.3185
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_014240genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.4e-1087130447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      WT+ E++l++ + ++lG+g Wk  ++   +++t+ q+ s+ qk+
      DCAR_014240  87 WTQKEHKLFLLGLQKLGKGKWKEMSKFYVQTKTPAQITSHAQKF 130
                      ***************************999************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.42879135IPR017930Myb domain
SuperFamilySSF466891.15E-1381135IPR009057Homeodomain-like
SMARTSM007177.2E-683133IPR001005SANT/Myb domain
TIGRFAMsTIGR015578.7E-1385132IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.3E-786126IPR009057Homeodomain-like
CDDcd001679.11E-787130No hitNo description
PfamPF002496.1E-887129IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MNGHHDENHS DNIWTCEVDK LLEELRENQF GDEWTFEDNK LIDDLQGNVE VLESSNKGSK  60
DLANEDGGGP SEKKKMTKRS RARPIQWTQK EHKLFLLGLQ KLGKGKWKEM SKFYVQTKTP  120
AQITSHAQKF YKRIDNPTPL DKRKHSINDI RFVEDFSSLT DIQPNILSPQ SSMAQNHVHH  180
TIEHPVLNNI NHHPNILQNF VPLNYNQSSI TSPQSIVPQN YIPHAIQHQV LNSLSPQPTV  240
TQNHALPNFQ QMAHNRMQQP ILFPENN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017245689.10.0PREDICTED: transcription factor MYB1R1-like
TrEMBLA0A165XPY80.0A0A165XPY8_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.14e-08MYB family protein