PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_014630
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 216aa    MW: 24507.2 Da    PI: 6.8588
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_014630genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.99e-17139189255
          AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr ++ +g+++AeIrdp   + k  r++lg++ t  eAa+a++ a+ +++g
  DCAR_014630 139 HYRGVRMRP-WGKFAAEIRDP---KrKGSRIWLGTYETSVEAARAYDCAAFRFRG 189
                  8********.**********8...4334************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.9E-31138198IPR001471AP2/ERF domain
CDDcd000184.41E-32138197No hitNo description
PfamPF008475.5E-12139189IPR001471AP2/ERF domain
PROSITE profilePS5103223.933139197IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-22139198IPR016177DNA-binding domain
SMARTSM003806.2E-37139203IPR001471AP2/ERF domain
PRINTSPR003675.3E-13140151IPR001471AP2/ERF domain
PRINTSPR003675.3E-13179199IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MKMMTNEEFW TLELISQHLL GEEFITSSDT IFLPDHLHSS VSESSNSTET FFESGYSEIE  60
STNSIHSLIN ISSPRHESHE NHSDSTFIST SSTEDDSDNY LLDFPITEPD FTASPKMKYK  120
RAKNKTAVCS RKSSETKKHY RGVRMRPWGK FAAEIRDPKR KGSRIWLGTY ETSVEAARAY  180
DCAAFRFRGS KAVLNFPSEA GKVEHAPHKY CMNVN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-29138197160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017248020.11e-160PREDICTED: ethylene-responsive transcription factor 5-like
TrEMBLA0A165XBI91e-159A0A165XBI9_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.15e-37ethylene responsive element binding factor 5