PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_014683
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family WRKY
Protein Properties Length: 298aa    MW: 32949.5 Da    PI: 10.1792
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_014683genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.24.6e-25208266259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   D+y+W+KY qK + g+ +pr+YY+C sa gCp++k+ver+++dp+v++ +YegeH+h+
  DCAR_014683 208 ADKYSWKKYDQKLIPGTLYPRGYYKCNSAsGCPARKHVERDSTDPTVLILIYEGEHRHH 266
                  69************************9998****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-25200266IPR003657WRKY domain
PROSITE profilePS5081126.199202268IPR003657WRKY domain
SuperFamilySSF1182906.93E-21204267IPR003657WRKY domain
SMARTSM007747.5E-25207267IPR003657WRKY domain
PfamPF031061.2E-21209266IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MAVDLINLQK MLSHSVFNES ASQEMNNIEE QLTRILQSHN QRVLSNGDSI KPLVTRKTGH  60
ARFRRAPVVI STSSEQIEPA KPVEPAEVKL EANCVEMKEK IVKESKVLDS SNSSGSSSSV  120
TREEGTVSNG KPLFSAPAPR TFSAGKPPLP TSHRKRCREV EVSQGLFGKP SGSRGCHCCK  180
RRKTVIKREI KRVVTSGSSK VSPDDIPADK YSWKKYDQKL IPGTLYPRGY YKCNSASGCP  240
ARKHVERDST DPTVLILIYE GEHRHHHHSS PHRHRSMKMP EGLTRLNNSS SGVGICC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-17195265574Probable WRKY transcription factor 4
2lex_A7e-17195265574Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179191KRRKTVIKREIKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017244464.10.0PREDICTED: probable WRKY transcription factor 17
TrEMBLA0A165X9N90.0A0A165X9N9_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.17e-47WRKY DNA-binding protein 11