PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_015132
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family TCP
Protein Properties Length: 347aa    MW: 39085.7 Da    PI: 9.5076
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_015132genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP129.14.3e-401042543136
          TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............ssssasec....eaesssssas 83 
                   kkdrhski T+ g+RdRR+Rls+e+a++fF Lqd LGfdk+skt+eWL+q +k aikel++              s+ s s+c      +       
  DCAR_015132 104 CKKDRHSKINTAHGPRDRRMRLSLEVARKFFWLQDLLGFDKASKTVEWLIQHSKIAIKELAERfphinkgsslvtgSALSTSDCdvvsGMD------- 194
                  69*************************************************************9999888888776555557774432222....... PP

          TCP  84 nsssg........kaaksaa.kskksqksaasalnlakesrakarararertrekmriknkl 136
                   +s++          ++  + k+ +s ++++ ++  akesr+kar++arert+ek +++++l
  DCAR_015132 195 -ESIPrtmssdkgVPSTGRKeKRTRSVRKPT-FHPRAKESREKAREKARERTKEKRQQQQQL 254
                  .222233333333333333324444444444.688888*******************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.7E-41105250IPR005333Transcription factor, TCP
PROSITE profilePS5136933.699105163IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137011.719230247IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MYPSDGYVSV NTPAFTENDF NSALGIQDLS ASSSSCFFHS SSPFNLYEDE AIYSQHLQAI  60
LCETNYQGMV ETNNVSVTGN TEKPSLIDVN VKLPDQVVVR KKMCKKDRHS KINTAHGPRD  120
RRMRLSLEVA RKFFWLQDLL GFDKASKTVE WLIQHSKIAI KELAERFPHI NKGSSLVTGS  180
ALSTSDCDVV SGMDESIPRT MSSDKGVPST GRKEKRTRSV RKPTFHPRAK ESREKAREKA  240
RERTKEKRQQ QQQLDVQQSG SLMSWRPFGT GEEPRAPSHN NTSNYSDRLP VEAGNRPNAR  300
KLQLQSQGIR EDIVNISDAN THLETGSCSP SALFNYHQQI NFWNFS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017248623.10.0PREDICTED: transcription factor TEOSINTE BRANCHED 1-like
TrEMBLA0A165WMM80.0A0A165WMM8_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24822256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.17e-27TCP domain protein 12