PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_015679
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family GeBP
Protein Properties Length: 336aa    MW: 37707.8 Da    PI: 4.5532
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_015679genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57380.62.4e-2581171398
       DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                  ++r+ws+eD i++ qGlid++ + + +p +d +af+e+vk+s+++kvs +ql eKi+ LK+K+k  ++      + +f+k+ +++ f ls  +Wg+
  DCAR_015679  81 AKRVWSDEDAIAIVQGLIDYELEYDEDPRSDYEAFFEYVKDSLQAKVSLTQLKEKIKTLKRKYKSLKDS-----DAVFAKPIEEELFRLSDTFWGQ 171
                  68*************************************************************999888.....99******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.0E-2082170IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MARKQRMPPA TVSQPLQNDA VEEHAASSES ERSPVKRTVT PDPKQKSGSK PDPRRSRKRG  60
SEKEEKVGVS KNARVEKNSS AKRVWSDEDA IAIVQGLIDY ELEYDEDPRS DYEAFFEYVK  120
DSLQAKVSLT QLKEKIKTLK RKYKSLKDSD AVFAKPIEEE LFRLSDTFWG QGNDNQGNAA  180
SKDKDMSIEI IEDGVVENGR KDKDTSIGIN DDDGVNEDDG KQQDTSIGVN ENVGNEGGDE  240
DDEDGEENEA EGLGFKELYP NLSRAWESDI GFGFPQALKD LTMRNLKLHA SEKMRALDKE  300
WKDLLVKELQ LYVDKLELKT KLAKVALDQM LSSDP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017245411.10.0PREDICTED: nucleolar transcription factor 1-A-like
TrEMBLA0A165A5Q20.0A0A165A5Q2_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00270.17e-17DNA-binding storekeeper protein-related transcriptional regulator