PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_015710
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family GeBP
Protein Properties Length: 256aa    MW: 28603 Da    PI: 5.1608
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_015710genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57381.41.3e-2570164397
       DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                  ++r++++eDei+l  G+i+fk+++  + s ++ af +fvk+s+s  vs++ql++Ki +LK+Kf  +v+k ++g++p   ++hd k fels+ i g
  DCAR_015710  70 VSRVFTKEDEIALVEGMIEFKETNQGNLSLNMAAFRSFVKDSLSCIVSQKQLLSKISKLKQKFLVNVSKLQNGEDPMSWRPHDYKLFELSRDILG 164
                  78******************9999999999*************************************************************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.1E-2071162IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MAQPQYLPSS SSKSESLVQE ISSDDFGSNS GSESQQLTKT PYDNVSPALK KPTSPLKPNA  60
KPPSIKAELV SRVFTKEDEI ALVEGMIEFK ETNQGNLSLN MAAFRSFVKD SLSCIVSQKQ  120
LLSKISKLKQ KFLVNVSKLQ NGEDPMSWRP HDYKLFELSR DILGSEVLGG MEKDNKDDHV  180
ASKTEEEPVL WWSLYPCLCV SLESVNVAKL VGAGPYLLLS MVVCLVYQLS FPVSFWDLCM  240
LFILFALYFE MMRFS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017227785.11e-108PREDICTED: uncharacterized protein LOC108192218
TrEMBLA0A165A5550.0A0A165A555_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00270.14e-06DNA-binding storekeeper protein-related transcriptional regulator