PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_015731
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family GeBP
Protein Properties Length: 236aa    MW: 26820.4 Da    PI: 5.1512
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_015731genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57362.31.2e-1934123297
       DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisf.kvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                  ++ r+ws+eD +vlLq ++d++   +k+p +d +af +fvk+++++ + s +ql  K+r+LK ++ +  kk         +   d+k+fel +k+Wg
  DCAR_015731  34 TSTRIWSDEDVLVLLQSILDYRIAYNKEPNADYSAFLHFVKDKLNMnDLSVRQLGGKVRKLKYRYSESLKK-------GEKDVGDDKVFELLHKVWG 123
                  578*****************************************97479**********************.......33457899**********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.4E-1636123IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MLSDDKSANR PSVKRKLAMG SPRSTRKKVC YDETSTRIWS DEDVLVLLQS ILDYRIAYNK  60
EPNADYSAFL HFVKDKLNMN DLSVRQLGGK VRKLKYRYSE SLKKGEKDVG DDKVFELLHK  120
VWGRTNDKDE VVVTENEGDE VVVTENEGKG EDQGSGFEET YPYLSEAWGS KFDLPQHLKE  180
LAVANFMMIG GEKLRALECE WKGVSVEELK LDVKKLEWRA KVVKAVLDEM EGSGD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017246083.11e-171PREDICTED: uncharacterized protein LOC108217715
TrEMBLA0A165A4P71e-169A0A165A4P7_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA23692041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00270.16e-12DNA-binding storekeeper protein-related transcriptional regulator