PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_015770
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ARR-B
Protein Properties Length: 362aa    MW: 41230.4 Da    PI: 5.1789
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_015770genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like41.62.7e-131371672454
      G2-like  24 sekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                  +e+A+P +il++m+v+gLt+++v+SHLQkY 
  DCAR_015770 137 EERAVPANILQVMNVEGLTRDQVASHLQKYQ 167
                  589***************************6 PP
2Response_reg81.62.5e-2741101109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEE CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdf 97 
                   vl +dD+++ + +l+ +lek +y +v+ ++d++eal +l++k +Dl+++D+ mp+m+Glel  +i++   +lp+i+++a +  e +   ++ Ga++f
   DCAR_015770   4 VLAIDDDRTCLYILKACLEKWKY-QVTLVKDAHEALSMLRNKSFDLVITDVHMPDMNGLELQDRINQDF-SLPVILISADSRAEVMCMGINNGAQRF 98 
                   7899*******************.*****************************************9999.9************************** PP

                   EESS--HHHHHH CS
  Response_reg  98 lsKpfdpeelvk 109
                   ++Kp+  ++l +
   DCAR_015770  99 FVKPIVADNLKD 110
                   *****9998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23003.8E-331126No hitNo description
SuperFamilySSF521728.82E-321120IPR011006CheY-like superfamily
SMARTSM004483.8E-252112IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011034.2623116IPR001789Signal transduction response regulator, receiver domain
PfamPF000726.4E-244110IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.52E-275115No hitNo description
SuperFamilySSF466896.27E-7137172IPR009057Homeodomain-like
TIGRFAMsTIGR015575.8E-11137167IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.602.0E-11138172IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MYNVLAIDDD RTCLYILKAC LEKWKYQVTL VKDAHEALSM LRNKSFDLVI TDVHMPDMNG  60
LELQDRINQD FSLPVILISA DSRAEVMCMG INNGAQRFFV KPIVADNLKD IWQFVEWWKR  120
NRNHNTAPGT QINGSSEERA VPANILQVMN VEGLTRDQVA SHLQKYQKFL ERVLVGEKNI  180
EFSNWTDLNY YSSFVMGNPN LVLLNQLRDE QRKGNLAAQN PLRPQKEGNL NIAARAPNGS  240
LSSFQRLPKL ILREESSSRT IYETFLQKTY GSANLASSEL GNAPSPKPRN KHRDPSMDIS  300
LCETQFGNTS AMNTHELGGE KLTDGRRFNN LEREDGNDYW LNIGNDEDEG EDKDLYPERD  360
L*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017245394.11e-165PREDICTED: two-component response regulator ARR1-like
TrEMBLA0A165A3T00.0A0A165A3T0_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31920.13e-33response regulator 10