PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_015850
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 222aa    MW: 24669.3 Da    PI: 4.3968
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_015850genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-18119169255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+++AeIr p ++g   r++lg+++ +eeAa a+++a+ kl+g
  DCAR_015850 119 RYRGVRRRP-WGKFAAEIRNPAKRG--SRIWLGTYDRPEEAALAYDKAAFKLRG 169
                  69*******.**********97765..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.28E-31118178No hitNo description
SMARTSM003805.3E-36119183IPR001471AP2/ERF domain
PROSITE profilePS5103224.223119177IPR001471AP2/ERF domain
PfamPF008473.9E-13119169IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-22119178IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.5E-31119178IPR001471AP2/ERF domain
PRINTSPR003671.2E-13120131IPR001471AP2/ERF domain
PRINTSPR003671.2E-13159179IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MFSSAALSDS DLAVLESIRQ HLFEDTDVLE CCFDNTSPCS EQTYGSEVSL DDLLMDEENT  60
DQVASFIFDF SKETSCCSLD DFDIIQGPLY NDPVEFEDPG KIELEVVAAE NGAAQKWQRY  120
RGVRRRPWGK FAAEIRNPAK RGSRIWLGTY DRPEEAALAY DKAAFKLRGS RAKLNFPDML  180
EPVDVAARCQ STEPTASSSS SSSTSTSDFQ SSKRRKTRPL A*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-28116177263ATERF1
3gcc_A8e-28116177263ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017245365.11e-163PREDICTED: ethylene-responsive transcription factor 2-like
TrEMBLA0A165A2611e-161A0A165A261_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-32ethylene-responsive element binding factor 13