PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_015884
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ARR-B
Protein Properties Length: 455aa    MW: 51197 Da    PI: 6.4527
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_015884genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like75.66.8e-24112163254
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                  +rl+Wt +LH+rFvea+  + G ++A+P +ile+m+v+gLt+ hv+SHLQkY 
  DCAR_015884 112 TRLVWTWDLHSRFVEAILLI-GYHRAVPTNILEVMNVEGLTRRHVASHLQKYQ 163
                  79***************999.*******************************5 PP
2Response_reg48.35.7e-1737140109
                   HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
  Response_reg  40 kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109
                    +k +Dl+l+D+ mp+m+G+el + i +e  +lp+i+++a    e + + lk Ga++fl+Kp+  ++l +
   DCAR_015884   3 GNKSFDLVLTDVHMPDMNGFELQRCIIQEF-SLPVILISADTRAEVMCNGLKNGAQRFLVKPVMADDLKD 71 
                   6789**********************8877.8*******************************9999976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011022.846177IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.66E-16176No hitNo description
Gene3DG3DSA:3.40.50.23002.2E-18276No hitNo description
PfamPF000721.2E-13371IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521723.42E-19477IPR011006CheY-like superfamily
PROSITE profilePS512949.478108167IPR017930Myb domain
SuperFamilySSF466893.05E-15110168IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.1E-22110164IPR009057Homeodomain-like
TIGRFAMsTIGR015577.8E-21111163IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    Send to blast
MLGNKSFDLV LTDVHMPDMN GFELQRCIIQ EFSLPVILIS ADTRAEVMCN GLKNGAQRFL  60
VKPVMADDLK DIWQFAKWWK RTKNIISAPP SQISGSSQES VTMVDSHNGK NTRLVWTWDL  120
HSRFVEAILL IGYHRAVPTN ILEVMNVEGL TRRHVASHLQ KYQRFLQSVL DGKKRIEFSR  180
WIDPDYHSRF ASGNPDLILL KQLINGKQKR TLASDNLLRP TKHENTRTPN GSKSSFGRLP  240
PFTIGDGSSS RSNNATLMQI NDSSTNVASR VLGNATLPKA QNEYMGSLIR NNTSNLIKNL  300
SYTTNQMDYS DQNTLADEND NNTGNSGAHG GANNIMFSST NNVTPSSFSH FWENFQSKQS  360
INVGDKNSNY IFYGNNINTD QLTQLGNNHE DPSMAISSGA NHFGNTPAMN LHEMDGEKKT  420
DGSWFDNIGR EDEKDCWFDI EIDEDEDYNP KKEF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A2e-15113167357Transcription factor LUX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017246393.10.0PREDICTED: two-component response regulator ORR25-like isoform X1
RefseqXP_017246394.10.0PREDICTED: two-component response regulator ORR25-like isoform X1
TrEMBLA0A165A1E00.0A0A165A1E0_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.12e-33response regulator 12