PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_016890
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family G2-like
Protein Properties Length: 183aa    MW: 20475.8 Da    PI: 7.0403
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_016890genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like23.89.8e-081183653
      G2-like 36 mkvkgLtlehvkSHLQkY 53
                 m+v gLt++hvkSHLQ++
  DCAR_016890  1 MGVAGLTIYHVKSHLQMW 18
                 99**************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.0E-6118IPR009057Homeodomain-like
PfamPF143792.2E-2358103IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MGVAGLTIYH VKSHLQMWIY FLMSKYRQAN YLTESAADGS KEDNKISGDS MDSPPGLQIN  60
EALRMQMEVQ KRLHEQLEVQ RQLQMRIEAQ ARYLQKIIEE QEKLGSSLIA PEGPPGAEDK  120
QFHPHSHQAA DASTPSQSPQ KKQKVNNEGS DRSAPSSAAS EIVTHWSRNL YNYHSHFSGP  180
SS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017251952.11e-92PREDICTED: uncharacterized protein LOC108222558
SwissprotQ9SJW07e-40PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A164XVV61e-132A0A164XVV6_DAUCS; Uncharacterized protein
STRINGEMJ036016e-59(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27962451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.26e-43G2-like family protein