PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_017288
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family GeBP
Protein Properties Length: 105aa    MW: 12186.5 Da    PI: 10.0359
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_017288genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57359.87.1e-192831797
       DUF573 17 qGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWg 97
                 q ++ +k+ +g +++++i +f +fv+ s+sf ++k+q+  Ki rL+kKf+++  + ++ +k ++ s++h++k + ls+kiW 
  DCAR_017288  2 QSMMRYKSAKGRDSTSNIAHFTDFVNPSLSFPATKTQVGRKIERLRKKFQNNFMReVNGKKPTNYSNKHQRKLYRLSEKIWT 83
                 89*************************************************998845555666799***************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.0E-18282IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
MQSMMRYKSA KGRDSTSNIA HFTDFVNPSL SFPATKTQVG RKIERLRKKF QNNFMREVNG  60
KKPTNYSNKH QRKLYRLSEK IWTTEVHVDS RDDDDDDEGV GDDN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A164Y6929e-72A0A164Y692_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.14e-09DNA-binding storekeeper protein-related transcriptional regulator