PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_018135
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 242aa    MW: 27569.3 Da    PI: 5.9706
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_018135genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.4e-1265117155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++ +h e+Er+RR+++ +    Lr+llP  +   ++K s ++  e+Av+YI++Lq
  DCAR_018135  65 KKIMHREIERQRRQDMGKLHVSLRSLLPLEF--IKGKRSISDHMEQAVNYINHLQ 117
                  5789*************************65..*********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.02E-1262131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.29E-1062121No hitNo description
PROSITE profilePS5088813.0964116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.8E-965117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.6E-966130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.5E-470122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MYFFNQGDEL VFQIQNFDNP NPEQQTIQQD PVMNRDSSCS RGRNKRHGKE VLSIGEDCKD  60
DERSKKIMHR EIERQRRQDM GKLHVSLRSL LPLEFIKGKR SISDHMEQAV NYINHLQGEI  120
RELDVKKNNL IKSTPKKFFI DDPGKGTSDL CLLDDNNDIS VTVTPCFCGV EIIITSGSME  180
ENLSLSGVMQ VLIQERQLNV TSCSSTRVND QLVHIIRAEG YEPAFIDICE LQQRLCGVIR  240
G*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017252048.11e-178PREDICTED: transcription factor bHLH36-like isoform X1
TrEMBLA0A164YRR41e-176A0A164YRR4_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.13e-37bHLH family protein