PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_018636
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 226aa    MW: 25699.8 Da    PI: 10.1016
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_018636genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.62.7e-12113154351
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                   +GV++ k + rW A I++      +k+++lg+ g+ eeAa+++++a+ 
  DCAR_018636 113 MRGVYY-K-NMRWQAAIKVE-----KKQIHLGTVGSQEEAARLYDRAAF 154
                  79**96.5.7*********6.....6********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510329.13784167IPR001471AP2/ERF domain
PfamPF008472.1E-6112155IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-8112157IPR016177DNA-binding domain
SMARTSM003807.0E-5112169IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-6114159IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MVSIRRRRLL GLSSGRSSIE DPLPKTSDNG HNPETPMKNS RASSVHPVPF IDIDQVKEND  60
ASEVHSGSSN VSIPSSSKEQ HHKKFSGIST VVEFKRRKRY RRKQIGNQEP CIMRGVYYKN  120
MRWQAAIKVE KKQIHLGTVG SQEEAARLYD RAAFMCGREP NFELSEKDKE ALRKLSWEEY  180
LAMTRSEINS KRHERRTRGR SSRKVDTIDS GYCDVDEGSI SGSED*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017251941.11e-167PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A164Z6291e-165A0A164Z629_DAUCS; Uncharacterized protein
STRINGXP_010242670.11e-76(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA62462433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.26e-44ERF family protein