PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_018701
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family G2-like
Protein Properties Length: 182aa    MW: 20534.2 Da    PI: 9.6346
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_018701genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like29.71.5e-091137127
      G2-like  1 kprlrWtpeLHerFveaveqLGGsekA 27
                 k+rl+Wt+e+He F +av+qLGG++k 
  DCAR_018701 11 KERLKWTQEMHELFEKAVDQLGGPDKN 37
                 68**********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.0E-71140IPR009057Homeodomain-like
PfamPF143791.3E-1757101IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MGSNRSGGVG KERLKWTQEM HELFEKAVDQ LGGPDKNKFK RSNSDILPNF SATVGAQLHE  60
ALQMQMGVQR RLSDQIEVQR NLKVKMEAQG RFLERIAEEH KSRPNINGKP RKSSSPVSLP  120
CLCKESESES DSDIQKSDIR SDEKFQGSKR AHFDQEDVLL RRHKNFAAGY CAQQCMFVPK  180
G*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017251064.11e-125PREDICTED: protein PHR1-LIKE 1-like
TrEMBLA0A161YNN41e-132A0A161YNN4_DAUCS; Uncharacterized protein
STRINGPGSC0003DMT4000594001e-52(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA101012026
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-22G2-like family protein