PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_019449

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

bZIP

Protein Properties

Length: 350aa MW: 37909.3 Da PI: 9.6983

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_019449	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.1	5e-15	271	323	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe ++++L++eN++L+++ e+l+k+ DCAR_019449 271 RRQRRMIKNRESAARSRARKQAYTMELEAEIAKLKEENEELRQKQEKLEKQKN 323 79**********************************************99865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.0E-12	267	331	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	12.197	269	321	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.7E-13	271	323	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.13E-11	271	323	No hit	No description
CDD	cd14707	3.29E-26	271	318	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.7E-15	271	324	No hit	No description
PROSITE pattern	PS00036	0	274	289	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence Send to blast
MNMNYNKNFE NEPPGDGGGR LQGSLSLARQ TSIYSLTFDE LQSTIGGSAK DFGSMNMDEL 60 LKSIWSAEET QTHNVGTSSG VQEGVPAPGG YLQRQGSLTL PRTLSQKTVD EVWRGFSKDY 120 GGGLRDGTSV PGGSNMPQAQ RQPTLGEITL EEFLVKAGVV REDVQPMEKP STNNMFGNFL 180 QSGNNSSFGI GFQQNGQNLG MMGNRTPGGG GLGMVGLGAG AVTVAMGSPA VSSDGIGKSN 240 GDTSSVSPIP YLFNGGLRGR KSSAVEKVVE RRQRRMIKNR ESAARSRARK QAYTMELEAE 300 IAKLKEENEE LRQKQEKLEK QKNQQQDLEV DHQQGPKRRC LRRTQTGPW*

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence Send to blast

MNMNYNKNFE NEPPGDGGGR LQGSLSLARQ TSIYSLTFDE LQSTIGGSAK DFGSMNMDEL  60
LKSIWSAEET QTHNVGTSSG VQEGVPAPGG YLQRQGSLTL PRTLSQKTVD EVWRGFSKDY  120
GGGLRDGTSV PGGSNMPQAQ RQPTLGEITL EEFLVKAGVV REDVQPMEKP STNNMFGNFL  180
QSGNNSSFGI GFQQNGQNLG MMGNRTPGGG GLGMVGLGAG AVTVAMGSPA VSSDGIGKSN  240
GDTSSVSPIP YLFNGGLRGR KSSAVEKVVE RRQRRMIKNR ESAARSRARK QAYTMELEAE  300
IAKLKEENEE LRQKQEKLEK QKNQQQDLEV DHQQGPKRRC LRRTQTGPW*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269\|PubMed:10636868, ECO:0000269\|PubMed:11005831, ECO:0000269\|PubMed:15361142, ECO:0000269\|PubMed:16284313, ECO:0000269\|PubMed:16463099}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017253142.1	1e-147	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Refseq	XP_017253143.1	1e-147	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
Swissprot	Q9M7Q4	1e-100	AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBL	A0A164ZPF8	0.0	A0A164ZPF8_DAUCS; Uncharacterized protein
STRING	VIT_03s0063g00310.t01	1e-110	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA776	24	97

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49720.1	2e-45	abscisic acid responsive element-binding factor 1

Link Out ? help Back to Top
Phytozome	DCAR_019449

Publications ? help Back to Top
Gao S, et al. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant, 2016. 9(9): p. 1272-1285 [PMID:27373216] Seok HY, et al. Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response. Planta, 2017. 245(2): p. 329-341 [PMID:27770200]