PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_019685
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family SAP
Protein Properties Length: 79aa    MW: 8145.95 Da    PI: 6.5134
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_019685genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP69.35.9e-228711881
          SAP 18 ggeggdassgesegpsssrqr.aanevwpePflealatqvaidasrslGrlaaasalanvfqvcs 81
                  g +g+a +g++++psssrqr + n+vwpePf+ealat+vai+as+s Grl aa+ l+n+fq++ 
  DCAR_019685  8 PG-DGGARGGDYDAPSSSRQRrSGNGVWPEPFVEALATHVAIEASQSEGRLVAAQVLFNLFQLAR 71
                 22.2345558999**999998799**************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    Send to blast
MSSPSSSPGD GGARGGDYDA PSSSRQRRSG NGVWPEPFVE ALATHVAIEA SQSEGRLVAA  60
QVLFNLFQLA RGSHSIMT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017251479.12e-39PREDICTED: transcriptional regulator STERILE APETALA isoform X1
TrEMBLA0A164ZUT56e-49A0A164ZUT5_DAUCS; Uncharacterized protein
STRINGevm.model.supercontig_211.211e-17(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1588756
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-09SAP family protein