PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_020060
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 139aa    MW: 16275.6 Da    PI: 10.0033
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_020060genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.41.2e-115498549
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
                 ++ rr+++NRe+ArrsRqRKk  +e+L  ++  L+ eN++Lk++l
  DCAR_020060 54 RKHRRMISNRESARRSRQRKKRHLEKLVAEMNRLKCENRELKEQL 98
                 689***************************************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.8E-1050121IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-95198No hitNo description
PROSITE profilePS5021710.6115298IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.45E-1054100No hitNo description
PfamPF001703.3E-95498IPR004827Basic-leucine zipper domain
CDDcd147024.39E-1255102No hitNo description
PROSITE patternPS0003605772IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
MIMSTEPAVQ LLFSPDEIND LLSFINYNPT TTSTTTTLSS SSDTNRSVYS LEERKHRRMI  60
SNRESARRSR QRKKRHLEKL VAEMNRLKCE NRELKEQLCL ATYRSHVVTA ETELLRSEYI  120
NLQTRLFRLY PSLMSMQL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16672RRSRQRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A164X1S95e-94A0A164X1S9_DAUCS; Uncharacterized protein
STRINGEOY156738e-31(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA28202251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18160.19e-17basic leucine-zipper 2