PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_020561
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 254aa    MW: 28528.5 Da    PI: 7.7315
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_020561genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.8e-1368120155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++ +hn+ Er RR++iN+ ++ L +llP a   + kKls  +++  +v+YI +Lq
  DCAR_020561  68 KKLNHNASERDRRKKINNLYSSLFSLLPDA--DRMKKLSIPATVACVVKYIPELQ 120
                  6789*************************6..49999***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.43367119IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.01E-1168124No hitNo description
Gene3DG3DSA:4.10.280.104.9E-1368137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-1468138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.5E-1068120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-773125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MLTLSPPLFP SFGWPLVDDH LNNISQDHEG TFFGNIDSID TSFSALPSPQ STNFEPIVSD  60
INTTGVVKKL NHNASERDRR KKINNLYSSL FSLLPDADRM KKLSIPATVA CVVKYIPELQ  120
KEVERLVQKK EELSSRMCRH REDHDDYQVG KRRKMERAET SSSAAVTISP VGGKEVVVQI  180
TALKADKGIL SEALDKLELG HGLLLLNASS FQSSGDRIFH SLHFQAQGKY ELELQAIKEK  240
IMSLYEKNKQ WLF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017257248.10.0PREDICTED: transcription factor bHLH100-like
TrEMBLA0A164WPK50.0A0A164WPK5_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22262256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-43bHLH family protein