PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_021029
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family BES1
Protein Properties Length: 300aa    MW: 32770.5 Da    PI: 8.3679
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_021029genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822180.95.7e-5651221117
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq.ss 97 
                  gg++r p+ +ErEnnkrRERrRRai++ki+aGLR qGny++p ++DnneVlkALc++AGw+ve+DGttyrkg+kp e++ea+g sa +sp+ss++ s 
  DCAR_021029   5 GGGTRVPSYRERENNKRRERRRRAITSKIFAGLRTQGNYPIPRHCDNNEVLKALCNQAGWTVEPDGTTYRKGCKPVENMEAVGGSAPVSPCSSYNlSP 102
                  6899*******************************************************************************************555 PP

       DUF822  98 lkssalaspvesysaspkss 117
                    ss+l+sp++s+ a   ++
  DCAR_021029 103 YGSSSLHSPASSSFAPNVNV 122
                  67888888887765544443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.5E-516134IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MATRGGGTRV PSYRERENNK RRERRRRAIT SKIFAGLRTQ GNYPIPRHCD NNEVLKALCN  60
QAGWTVEPDG TTYRKGCKPV ENMEAVGGSA PVSPCSSYNL SPYGSSSLHS PASSSFAPNV  120
NVDGNSLIPW LNRLSYASSS ASSSCSQLQQ VGVQFGSISA PVISPLTSLA HTPRLQTETG  180
WNTPQNSFFV SPTPPNSSCQ IFPNSEWLNG PQIPPPRAPG SPTFSLISPN PFDLNEVAQP  240
DQKADVSMEE AKMMDEFAFK GSTRQMNPWE GERIHEEFVS DDLKLTLGTP QSRNDNKKH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A6e-22980372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B6e-22980372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C6e-22980372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D6e-22980372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017257471.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV882e-79BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A164WCR00.0A0A164WCR0_DAUCS; Uncharacterized protein
STRINGXP_004489001.15e-81(Cicer arietinum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-69BES1/BZR1 homolog 4