PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_021286
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 259aa    MW: 28711.5 Da    PI: 7.4734
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_021286genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-1365112355
                  HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  r+h+++ErrRR+riN  +++Lr ++P        K++Ka+ L ++++++k+L+
  DCAR_021286  65 RNHSQAERRRRERINGHLATLRNIIPGT-----AKMDKASLLAEVIDHLKQLR 112
                  58*************************6.....5*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.82862111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.96E-1165113No hitNo description
Gene3DG3DSA:4.10.280.104.2E-1465113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.2E-1165111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.07E-1466115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-1268117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MELSHSLDAF LENYEHKGIV SGGGGSSLVL DSERGEIVRA VSSNLNKPVV QKGCLNPEKA  60
MVALRNHSQA ERRRRERING HLATLRNIIP GTAKMDKASL LAEVIDHLKQ LRRNAADVTK  120
GILVPMDIDE VRVEQQYDSS GGDSCSIRAS ICCEYKHEVL SDLRQALEEF QLKTVKAEIA  180
TLGSRMTNLF EISCCKQENI QDTEGCQLFA NSVRQALRSV LDKFHASEEF TTNSALSNKR  240
RRVSLFNSSN ESSLGSFW*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17075ERRRRE
2238242KRRRV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017254275.10.0PREDICTED: transcription factor bHLH30-like
TrEMBLA0A161YEQ60.0A0A161YEQ6_DAUCS; Uncharacterized protein
STRINGXP_009611307.11e-98(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA119892123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-33bHLH family protein