PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_021334
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family MYB_related
Protein Properties Length: 277aa    MW: 31991.8 Da    PI: 6.3172
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_021334genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.31.3e-1198142347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT eE++l++ + +q G+g WktI+++    +t+ q+ s+ qk+
      DCAR_021334  98 PWTVEEHKLFLIGLQQEGKGEWKTISKKYLPSKTPAQIASHAQKF 142
                      7*************************99888************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.72391147IPR017930Myb domain
SuperFamilySSF466893.07E-1392146IPR009057Homeodomain-like
TIGRFAMsTIGR015573.4E-1194143IPR006447Myb domain, plants
SMARTSM007175.1E-695145IPR001005SANT/Myb domain
CDDcd001674.34E-798142No hitNo description
Gene3DG3DSA:1.10.10.601.9E-898138IPR009057Homeodomain-like
PfamPF002493.9E-898141IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MTDDGYTRDG WSFKENKIYE SAMMNFENTN SVAFLEHVAL LMPWQTIESI KNHGQILKED  60
IGLIRSSNGK FEDIVEVDME MEGETKKVAR RPKKRGIPWT VEEHKLFLIG LQQEGKGEWK  120
TISKKYLPSK TPAQIASHAQ KFEKRMHTKT PPEKRRTSIN DIKLCPEPKF PLANSAGFQS  180
NQLGSFLKPQ DFHPNQAAFT LDSQNFMPNQ TTFPFDAQHF EANQFSFSLD PQDFQQDPFN  240
FSLDFQPNQL NFPWNSQNFE TNQPGNDTFS DHVRNY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A164W5950.0A0A164W595_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52342032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10580.21e-25MYB_related family protein