PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_021800

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

FAR1

Protein Properties

Length: 96aa MW: 11180.8 Da PI: 9.1483

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_021800	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	35	4.6e-11	11	74	1	69
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvk 69 ++Y++YAk+ GF v ++s+k +g+ + + + C +eg+r +++k+ e r ++ t+Cka++++ DCAR_021800 11 QYYENYAKQEGFAVFSRTSTKG--EGNKIYKILSCCREGQRVSKSKN---EFRMKPYAGTNCKARINIL 74 69************999988..56669999*******9999...99999********9985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.0E-8	11	74	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 96 aa Download sequence Send to blast
MFFDSYEQVL QYYENYAKQE GFAVFSRTST KGEGNKIYKI LSCCREGQRV SKSKNEFRMK 60 PYAGTNCKAR INILLVIPHW SHDHATTIVI WQEHI*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A164VTH7	2e-66	A0A164VTH7_DAUCS; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA17402	2	4

Link Out ? help Back to Top
Phytozome	DCAR_021800