PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_021811
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family NAC
Protein Properties Length: 191aa    MW: 22124.1 Da    PI: 8.5843
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_021811genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.23.7e-24161281109
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr...atksgyWkatgkdkevls 94 
                  lp+GfrF+Ptdeel+ +yL +k+++ +l++  +i+++ +i++++P++Lp  v   e++ y+F+kr+  y++  r++    + +s+yWk+ gk++++ +
  DCAR_021811  16 LPVGFRFRPTDEELILYYLMPKAQSLPLPA-AFIPQIdEIFQSHPSHLPGDV---EQRRYYFCKRSWDYSKTCRSRInyiSNESSYWKQAGKERAISV 109
                  79***************************9.78999977**********554...5678********99975544442144779**********9998 PP

          NAM  95 k....kgelvglkktLvfy 109
                       ++ +vg+kk + f 
  DCAR_021811 110 DvahrRSIVVGTKKLFDFD 128
                  777667778*****99985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.89E-2613136IPR003441NAC domain
PROSITE profilePS5100523.9916171IPR003441NAC domain
PfamPF023651.1E-1317131IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MEKNCIVGRN GEELQLPVGF RFRPTDEELI LYYLMPKAQS LPLPAAFIPQ IDEIFQSHPS  60
HLPGDVEQRR YYFCKRSWDY SKTCRSRINY ISNESSYWKQ AGKERAISVD VAHRRSIVVG  120
TKKLFDFDNW VAYRVYQRKR NGRVKNTREN TKKMDVAEGV EMMSINNATE VESSPLPSPL  180
CSSNDEETFL *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017255574.11e-137PREDICTED: NAC domain-containing protein 41
TrEMBLA0A164VT841e-141A0A164VT84_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14000.16e-25NAC domain containing protein 84