PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_022080
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ARR-B
Protein Properties Length: 427aa    MW: 47512.2 Da    PI: 6.7935
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_022080genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like33.97e-111021312554
      G2-like  25 ekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                   kA+P tile m+ +g+++e+v+SHLQkYR
  DCAR_022080 102 AKAIPNTILEKMNEPGVSREQVASHLQKYR 131
                  69**************************** PP
2Response_reg33.71.9e-1216049109
                   EESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
  Response_reg  49 lDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109
                   +D+ +p+mdGl+llk i++   ++p+i+ t+    e++ + l+ Ga+ +l Kp+ p+++++
   DCAR_022080   1 MDVHLPNMDGLQLLKCINKDY-DIPVILTTDDVMHELIGDGLNNGAESCLLKPILPDAVRD 60 
                   8****************9976.9*******************************9988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23002.4E-12169No hitNo description
PROSITE profilePS5011020.683166IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521721.57E-12165IPR011006CheY-like superfamily
CDDcd001567.10E-10165No hitNo description
PfamPF000729.4E-9160IPR001789Signal transduction response regulator, receiver domain
TIGRFAMsTIGR015577.4E-10100132IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.604.2E-8102132IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MDVHLPNMDG LQLLKCINKD YDIPVILTTD DVMHELIGDG LNNGAESCLL KPILPDAVRD  60
IWQFYELRKV NKNIHTMSGS SLAKVPSSIG PSTTDNSNDK PAKAIPNTIL EKMNEPGVSR  120
EQVASHLQKY RKFLNGVLDG KISLQSSKYC SNLNYNHSSI VDGNPNLFLI NQLRNEQRSS  180
KDAAPIRASL PMLRFNEAGS SSRLIMNAMS APNYAPCADI NIKADWLSNG IATSENDGNL  240
NIGNIVESNH AYYNRYEEGE KGDYNQTTLT PHQNNKFSDG GLLGGANIND WLHATNLTVL  300
SDSVIESIHN AFISQPPLNP EAQGNTRIFN RNNFNRVQTR YMQPTHSGIG ASLVANQDEY  360
TFPVNKKPRN GDDDCNELNN FDLLSFDPDS SKIVQNPFHV LSRKLVRRKE KRKHFLGNLE  420
NSYQGI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1406412RRKEKRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017256488.10.0PREDICTED: two-component response regulator ORR24-like
TrEMBLA0A164VM150.0A0A164VM15_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.13e-12response regulator 2