PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_023844
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family HB-other
Protein Properties Length: 922aa    MW: 103215 Da    PI: 6.3013
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_023844genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.93.4e-182378257
                 T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
     Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                  kR   t+ q+  Le+l+e+++yps++ + +LA++lgLte+qV+ WF+ rR k+kk
  DCAR_023844 23 PKRKVKTPAQIGGLERLYEEHKYPSESLKMQLAESLGLTEKQVSGWFCHRRLKDKK 78
                 68999*************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.37E-161080IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.4E-181278IPR009057Homeodomain-like
PROSITE profilePS5007116.4711979IPR001356Homeobox domain
SMARTSM003894.3E-182183IPR001356Homeobox domain
PfamPF000467.2E-162378IPR001356Homeobox domain
CDDcd000867.06E-152480No hitNo description
Gene3DG3DSA:3.30.200.207.1E-26492569No hitNo description
SuperFamilySSF561121.22E-55493754IPR011009Protein kinase-like domain
PROSITE profilePS5001125.941507844IPR000719Protein kinase domain
PfamPF000692.8E-31518682IPR000719Protein kinase domain
Gene3DG3DSA:1.10.510.102.1E-24570682No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0003677Molecular FunctionDNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 922 aa     Download sequence    Send to blast
MSFNLCAVDT FSDDNDDLPE KKPKRKVKTP AQIGGLERLY EEHKYPSESL KMQLAESLGL  60
TEKQVSGWFC HRRLKDKKLK DDPNAYGKQD RSSGVIQDRG SGLKQDSCGS TKQGEQRHSE  120
PREVESKRFT GEKVPGSQDI TCEPVSDQIQ NDSGTDDTSS GSSFPLQNNY FSRSTEPRGM  180
VTSIDVSRKG NSKAVAVEGL KVRTKPSGYL KVKVQAEHVA ITSVKRQLGR HYKEDGPPLG  240
IEFDPLPPGA FESPIRDAVE EPGLVCESIP FSSRNSMTCK QRHPGRGYGD YLSRASSRNS  300
DLDMTSMQVM QKSNSRENYL DLHGEKKPTF SYDRNSAGKM YSSMEMNEDF AREAVRDIRD  360
GKEMRTTHHG RINEFDFNRR MKESASNDRV PMYGKRLDRR QREPSDFGDV GEKFTLTKSS  420
ESRPSNFPVK HNDFFPLEER KASRQAIKET DAYGKKRQFD AYYDPVEVSA FPANEIRHKI  480
FFADTDNADI AAHAFTFREM ATATKNFRQE CVLFDDGFGR VFKGTLKSTG QVVAVKQLDR  540
NGIKGTKEFL DEVRILSPIK HPNLINLLGY CADGDQRILV YDYMPLGSLE THLLDAERAA  600
DKNPLDWVTR MKIATGAAQG LEYLHEEAKP PIIYSDFKSS KILLDDNYNP KLCDFGLAKL  660
AESGNAAIPA RVMGTYGYSA PEDPKRFPEM ADPLLNKDFS VKSLNQAVGV AAMCLQEEPT  720
VRPYITDVVA ALSFLEFDAP NPPAPTASPD KESAKENDHA DNVSSRSSSP SDHNADSCDH  780
SDHEDNNDII SQSTEMPDGS SVDHEFEHDH SSSSGDEQYD DAENEPKSRT NTMKSTDSKT  840
DKEMEDSEDE SIYSSSSSSS DKKDDDDNDD DDELGEKKSS KTKKKVKSKI KSSIRHAAGT  900
NKKIKNKWRK AKTVLHHKTK K*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j5t_A3e-5749468273266Probable serine/threonine-protein kinase PBL2
6j5t_D3e-5749468273266Probable serine/threonine-protein kinase PBL2
6j5t_I3e-5749468273266Probable serine/threonine-protein kinase PBL2
6j5t_J3e-5749468273266Probable serine/threonine-protein kinase PBL2
6j5t_M3e-5749468273266Probable serine/threonine-protein kinase PBL2
6j5u_C3e-5749468273266Probable serine/threonine-protein kinase PBL2
6j5v_C3e-5749468273266Probable serine/threonine-protein kinase PBL2
6j6i_A3e-5749468273266Probable serine/threonine-protein kinase PBL2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017219641.10.0PREDICTED: uncharacterized protein LOC108196733 isoform X1
TrEMBLA0A161ZKX80.0A0A161ZKX8_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA34362242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.13e-58HB-other family protein