PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_026090
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 255aa    MW: 28241.4 Da    PI: 7.3037
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_026090genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.48.1e-11135182455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  DCAR_026090 135 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 182
                  8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.83E-9129186No hitNo description
SuperFamilySSF474596.15E-18129200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-18131200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.828131181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.5E-8135182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-10137187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MDNNVTPIVN ENCFSAPNPS SYTLSEIWPP SSSSSLPNPS NHNNNLAAQL AADVTTTSND  60
DKSSLTHHSR GNNKRLKDRT EKDSNSKRSK VVESEQENCG TRTQVEASSD SGTKPTEPVK  120
DYIHVRARRG QATDSHSLAE RARREKISER MKILQDLVPG CNKVIGKALV LDEIINYIQS  180
LQHQVEFLSM KLEAVNSRIE PTIEGFPLKN LGTPTLDETG LIFASQTPRE YAHGSQRDWL  240
HMQVGGSIEK QHKI*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017215895.10.0PREDICTED: transcription factor bHLH79-like
SwissprotQ69WS39e-69BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A164UKY40.0A0A164UKY4_DAUCS; Uncharacterized protein
STRINGXP_006476705.12e-96(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12872471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.11e-72BIG PETAL P