PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_027275
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 247aa    MW: 28466.4 Da    PI: 9.2038
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_027275genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.12e-0576116146
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLek 46 
                  r+r h   Er RR++ ++ + +L  llP+      +K +K +i   
  DCAR_027275  76 RCRRHMLSERMRREKQKNNYMRLHALLPSG-----TKRDKHSIILT 116
                  6788999**********************6.....45555555444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.44E-971135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.35E-673126No hitNo description
PROSITE profilePS5088810.76675124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-679138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MEHFFAYHSQ PADFSWPQEE VLAQPSAFVS YTQQSVNEAP AVGSGGVNVK KRMREFLMRS  60
MSTSDREMCD YSEKERCRRH MLSERMRREK QKNNYMRLHA LLPSGTKRDK HSIILTAAQE  120
VQELKKCREE LRRQQKEMLG AIEGSRGEEE SEMEQAKIRI DVARPSSGVD SMLEVLKCLK  180
HTNSNVRLIQ SKFLPQQFSA VLGIETKVGA AEVEQEVHRT LFQVEKKFRH SRVEPSHTHG  240
SFLFHS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017221908.10.0PREDICTED: transcription factor bHLH92-like
TrEMBLA0A175YPB40.0A0A175YPB4_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA124631821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.12e-40bHLH family protein