PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_028854

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

VOZ

Protein Properties

Length: 433aa MW: 47733.4 Da PI: 9.4915

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_028854	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	160.4	1e-49	14	109	116	211
VOZ 116 rrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkvskdsladlqkk 211 + afesgnrkqrslpdy+grgwhesrkqvm+ef glkrsyymdpqp+++++whlyeyei++++a+alyrle+klv +kk +kgk kds+a+lq+ DCAR_028854 14 QGAFESGNRKQRSLPDYEGRGWHESRKQVMNEFVGLKRSYYMDPQPMKNLKWHLYEYEISKCNAFALYRLEVKLVVGKKRPKGKFGKDSVAHLQNA 109 569*******************************************************************************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence Send to blast
MNGEPDSSSN RKIQGAFESG NRKQRSLPDY EGRGWHESRK QVMNEFVGLK RSYYMDPQPM 60 KNLKWHLYEY EISKCNAFAL YRLEVKLVVG KKRPKGKFGK DSVAHLQNAS HEIFQVPVDI 120 FDVVFMCELV EIAIPKMMHI YVITQAPLNT RPPSPPEVNI SQEYFHSQHE YEFVDNDRDE 180 VMDDIDQEPD NLFGDEFDSD ESDADYLVTG SESSGDSFFS DASNVDSTDD EVVVQKGEKQ 240 QKANAKEVQA AAKGRSKGKG GEKGKGKGGE SGKASAAKGK GDAAKGKGSA GKGKEMLQRR 300 SLLAADKDKG CEKPVKTRTK KPVKPVNTTL AVVGEEVQGR PKQQNKATCK ERPSKNKATA 360 TTNLGAERPY SNPAMGTTNE GGSVPEGSQG GIFAQQGKNK ATNKGVTSTQ RVLDQARRER 420 RKKFEQNAAW KI*

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence Send to blast

MNGEPDSSSN RKIQGAFESG NRKQRSLPDY EGRGWHESRK QVMNEFVGLK RSYYMDPQPM  60
KNLKWHLYEY EISKCNAFAL YRLEVKLVVG KKRPKGKFGK DSVAHLQNAS HEIFQVPVDI  120
FDVVFMCELV EIAIPKMMHI YVITQAPLNT RPPSPPEVNI SQEYFHSQHE YEFVDNDRDE  180
VMDDIDQEPD NLFGDEFDSD ESDADYLVTG SESSGDSFFS DASNVDSTDD EVVVQKGEKQ  240
QKANAKEVQA AAKGRSKGKG GEKGKGKGGE SGKASAAKGK GDAAKGKGSA GKGKEMLQRR  300
SLLAADKDKG CEKPVKTRTK KPVKPVNTTL AVVGEEVQGR PKQQNKATCK ERPSKNKATA  360
TTNLGAERPY SNPAMGTTNE GGSVPEGSQG GIFAQQGKNK ATNKGVTSTQ RVLDQARRER  420
RKKFEQNAAW KI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	89	95	GKKRPKG

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A175YJ26	0.0	A0A175YJ26_DAUCS; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	9e-44	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	DCAR_028854