PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_028882

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

BES1

Protein Properties

Length: 163aa MW: 18388.7 Da PI: 8.8984

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_028882	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	124.2	1.7e-38	35	115	3	84
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaags 84 + r p++kEr nnk+RER+RR i+ ki+aGLRa+Gny+lpk+aD n+ l+ALc eAGw v++DG++y+k ++ ++s DCAR_028882 35 KYRYPSEKERQNNKQRERKRRSISKKIFAGLRAYGNYQLPKHADSNDLLRALCDEAGWHVDEDGNVYKKEAMLR-MPSLINS 115 6799****************************************************************876554.3334433 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	4.3E-34	36	106	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence Send to blast
MVKEGGEGLK SGCIKSSHGP WLVHKTTKDG GVVTKYRYPS EKERQNNKQR ERKRRSISKK 60 IFAGLRAYGN YQLPKHADSN DLLRALCDEA GWHVDEDGNV YKKEAMLRMP SLINSGFDAR 120 IEEQFKNKTF SSFDDDIQAR TTSLSLGCSF EEHDINLCLS LS*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	7e-14	37	103	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	7e-14	37	103	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	7e-14	37	103	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	7e-14	37	103	372	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017222428.1	1e-119	PREDICTED: BES1/BZR1 homolog protein 3-like
TrEMBL	A0A175YIZ7	1e-118	A0A175YIZ7_DAUCS; Uncharacterized protein
STRING	XP_009795965.1	2e-54	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6204	21	30

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18890.1	3e-16	BES1/BZR1 homolog 3

Link Out ? help Back to Top
Phytozome	DCAR_028882