PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_028883
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family ERF
Protein Properties Length: 219aa    MW: 24134.8 Da    PI: 5.4458
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_028883genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.33.2e-072566248
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                  ykGV+ +k + +W A++ +   +    + ++g++ t+ eAa a+++
  DCAR_028883 25 LYKGVYEKKGKEKWYAQCSH---G--GENAYIGTYNTELEAALAYDK 66
                 59***98887788****666...2..399********99******96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.5E-102581IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.4E-112582IPR001471AP2/ERF domain
PROSITE profilePS5103212.472581IPR001471AP2/ERF domain
SMARTSM003800.00212587IPR001471AP2/ERF domain
PfamPF008472.0E-42665IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MASENPDDRK EFDPLVYGSK MPHKLYKGVY EKKGKEKWYA QCSHGGENAY IGTYNTELEA  60
ALAYDKRGRE LKRPEEKLNF PKFLTEHNPP AATEPALPIT NALSSSVQVN VPSGSSSSNA  120
GRGEKRKQIT ISKEEYDAYL PYHEARKIEF AQRGRNVSVS GVAIRSQSAN ISSAIMELIG  180
NPGEFKDVPD EELLSDAEKE FVESLLNQGT SSDDGKLS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017221124.11e-160PREDICTED: ethylene-responsive transcription factor RAP2-3-like
TrEMBLA0A175YJF51e-159A0A175YJF5_DAUCS; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.12e-07ERF family protein