PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_030068

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

bZIP

Protein Properties

Length: 193aa MW: 21945.7 Da PI: 6.3526

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_030068	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.4	3.1e-13	84	139	5	60
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +++rr+++NRe+ArrsR RK++ ++eL v L +e +L+++l++ ++ +k+ DCAR_030068 84 RKQRRMISNRESARRSRMRKQKHLDELLSQVYRLRTEKNDLIDKLNNVSESHDKVL 139 689******************************************99999887765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.3E-10	80	144	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.312	82	145	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.5E-10	84	156	No hit	No description
SuperFamily	SSF57959	1.13E-11	84	133	No hit	No description
Pfam	PF00170	3.1E-11	84	142	IPR004827	Basic-leucine zipper domain
CDD	cd14702	1.72E-18	85	136	No hit	No description
PROSITE pattern	PS00036	0	87	102	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence Send to blast
MMFPSEFLGT QTLAQECISH VDNNCSVIQS NMSPLQDFDN FLAKYMTLQN AIPGPDFNSQ 60 SSCVSNNSTS DEGDELHLSI INERKQRRMI SNRESARRSR MRKQKHLDEL LSQVYRLRTE 120 KNDLIDKLNN VSESHDKVLL ENARLKEEAS NLRRMVTDIQ LASTYNGLRD LEELPCTTPH 180 LIANTSPNCK TV*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	96	103	RRSRMRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017225769.1	1e-141	PREDICTED: basic leucine zipper 43-like
TrEMBL	A0A175YFW8	1e-139	A0A175YFW8_DAUCS; Uncharacterized protein
STRING	cassava4.1_022183m	1e-64	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA947	24	92

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	2e-39	basic leucine-zipper 42

Link Out ? help Back to Top
Phytozome	DCAR_030068