PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_030075
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 464aa    MW: 51574 Da    PI: 6.5134
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_030075genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.87.1e-11177218546
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                  k  rr+++NReAAr+sR+RKka++++Le+    L++  ++Lk
  DCAR_030075 177 KTLRRLAQNREAARKSRLRKKAYVQQLETSRLRLTQLEDELK 218
                  788*************************98777777776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.1E-8173237IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.381175219IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.5E-8175220No hitNo description
SuperFamilySSF579591.06E-6177220No hitNo description
PfamPF001705.5E-7177217IPR004827Basic-leucine zipper domain
CDDcd147083.19E-22177228No hitNo description
PROSITE patternPS000360180195IPR004827Basic-leucine zipper domain
PfamPF141442.3E-31262335IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MQRHKATVSN NSDMYCHPSF YLSGRNETTR FADLGELDES TAFHQEDAVV LSPSPVYYEL  60
KQPNVTILSN NNLHFGGHTT NYSSTEMVGS RGVVDTGQQM MMHKEAATMV GLGGGNALGN  120
GHFENWGDSG LADNSQQTDT STDVDTDDKN QYIRVPSGAV TVVDSVDQSS ARPGDQKTLR  180
RLAQNREAAR KSRLRKKAYV QQLETSRLRL TQLEDELKRA RQQGLYMSAG ICGDQTHPTG  240
LNVAMAFDMD YARWLEEHQR LVNELRSVMN SHLGDAELRV LVDGIMSHYD EIFRLKGVAA  300
KSDVFHMLSG MWKTPAERCF MWLGGFRSSE LLKILGNQLE PLTDQQLMGI CNLQQSSQQA  360
EDALSQGMEA LQQSLVETLS SNSLGPTGSG NVADYMGHMA IAMGKLSTLE NFLYQADLLR  420
QQTLQQLHRI LTTRQAARAL LVISDYMSRL RALSSLWLAR PKN*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017226595.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
SwissprotQ415581e-175HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A175YFR60.0A0A175YFR6_DAUCS; Uncharacterized protein
STRINGEOY021120.0(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8202385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-145bZIP family protein