PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_030478
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bZIP
Protein Properties Length: 144aa    MW: 17229.4 Da    PI: 9.841
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_030478genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.4e-102282363
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                 e+k+ +r+++NRe+ArrsR ++++ ++ L + +   ++ +++  + +++ +++  + ++++
  DCAR_030478 22 EDKKRKRMISNRESARRSRMKRQQHMQDLNNQIMFYKNRRTEINQSISNFTEQFTAIENQN 82
                 79*********************************99999999999999999888777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-142084IPR004827Basic-leucine zipper domain
PfamPF077162.1E-82170IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.8182285IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.86E-102475No hitNo description
Gene3DG3DSA:1.20.5.1705.4E-82480No hitNo description
CDDcd147021.74E-102554No hitNo description
PROSITE patternPS0003602742IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MDHAKRPSSG SEEDDRYMMI TEDKKRKRMI SNRESARRSR MKRQQHMQDL NNQIMFYKNR  60
RTEINQSISN FTEQFTAIEN QNRIMRAQKE ELRKRLEAAE LVTSYLDAAK GYPVNTAEEP  120
WYYNLWQPSQ SMPIMTSAEF FQF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13742RSRMKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017223912.11e-103PREDICTED: bZIP transcription factor 53-like
TrEMBLA0A175YH141e-102A0A175YH14_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1512878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.11e-24basic region/leucine zipper motif 53