PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_031282
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family GeBP
Protein Properties Length: 122aa    MW: 13915 Da    PI: 10.3858
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_031282genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57371.91.2e-2211104497
       DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkep.sfskehdqkifelskkiWg 97 
                   ++++++Dei lL+ +i +k+++  ++++d+ +f +fvk  +sf +sk+q+  Ki+rL+ Kf+++ k+ k+gk+p    ++h+ + ++lskkiW 
  DCAR_031282  11 TKVFTQKDEIKLLKSMIRYKSEKSRDATSDLADFTDFVK-PLSFPASKTQVGGKIQRLRTKFRNNFKREKHGKKPiGYFNKHQCQLYGLSKKIWA 104
                  689*********************************997.69**************************999998736789999***********6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045048.1E-2112103IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    Send to blast
MEVMKSAPII TKVFTQKDEI KLLKSMIRYK SEKSRDATSD LADFTDFVKP LSFPASKTQV  60
GGKIQRLRTK FRNNFKREKH GKKPIGYFNK HQCQLYGLSK KIWATLVQVD SDDEEGVGND  120
N*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A175YC271e-84A0A175YC27_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138051214
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.18e-11DNA-binding storekeeper protein-related transcriptional regulator