PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID DCAR_031333
Organism
Daucus carota
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus
Family bHLH
Protein Properties Length: 484aa    MW: 53802.8 Da    PI: 7.5399
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
DCAR_031333genomeARS-USDAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.83.5e-12317360553
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                  h + Er+RR+r+N+ fe Lr+llP+       K +Ka++L  +veY++ 
  DCAR_031333 317 HMIKERKRRERLNQNFEALRSLLPPG-----SKKDKASVLNSTVEYMNL 360
                  8899********************95.....599************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512575125No hitNo description
SuperFamilySSF474591.1E-15309381IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.67E-12310361No hitNo description
PROSITE profilePS5088815.243312361IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-12315377IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.9E-10317360IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-10318367IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MESIFKLSEG DRTAYLHQMS SSLGCTYVCL WSYLPQPSNC LVFLDGVYHE EYTDKLAIGG  60
SSSSLSVTSL PSRLFYVYQK SVLSVDDGRV PGIAFKNSIP YLEYKGLELQ TLTSTQVQLQ  120
FYQEARIKVN VEAQMKNLFP QEFSLQVVPR ELTDQPTDQT VPPSLPPPLL PISTNIASTS  180
HNPNPTLQQP FPPLVSSPNT NDAFQETIDT LNQIRNVNFP TIESEDAAIT QAILAVISSS  240
TSPSPTSSAS SPQPPQRSSA FKTYRRSVLA PGRQITRPRR PNMLKLAVEF IRSSSSLMRG  300
QERSQTGSRS GSNQLQHMIK ERKRRERLNQ NFEALRSLLP PGSKKDKASV LNSTVEYMNL  360
LISEVRELNR RNQILLSQQH EETNEANNQE TIGGTSLPST NAGDHRLDIL IANVAETTSE  420
ARVLDLRVRV RGECSISDIV IRVLEFLRQV ANVGLLSVEA STQMVGTAAV SDFVWRFKIE  480
NEL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1320325ERKRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017227923.10.0PREDICTED: putative transcription factor bHLH041 isoform X3
TrEMBLA0A175YBX80.0A0A175YBX8_DAUCS; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45672339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.11e-40bHLH family protein