PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_031668

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

Protein Properties

Length: 137aa MW: 15322.4 Da PI: 9.0788

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_031668	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	41.7	2e-13	46	124	14	95
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEE CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvk 95 + ++l k+ ++ k + t ++ ++ + W + + +++ +r+ ++kGW+ Fv++n+Lk+gD v+F+l+ + +fe vk DCAR_031668 46 HGVYLGKSLESAARDWK-AG-TTVMFNKGRNLWPIGV--SGTNNRIRFSKGWNAFVQENDLKVGDCVTFTLQADgLSFEIDVK 124 55555555433333232.23.5566677889****..99999999*********************9987677776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101936	2.35E-15	30	116	IPR015300	DNA-binding pseudobarrel domain
Gene3D	G3DSA:2.40.330.10	9.5E-15	31	121	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	1.75E-12	32	123	No hit	No description
Pfam	PF02362	1.2E-10	33	120	IPR003340	B3 DNA binding domain
PROSITE profile	PS50863	10.715	76	127	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 137 aa Download sequence Send to blast
MDYMWFNIDV DTDMLVDEAP MHGEQHGHAL VFTKIMQASR VDGRSHGVYL GKSLESAARD 60 WKAGTTVMFN KGRNLWPIGV SGTNNRIRFS KGWNAFVQEN DLKVGDCVTF TLQADGLSFE 120 IDVKYAKTKR GMKSKT*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A175YBD9	1e-97	A0A175YBD9_DAUCS; Uncharacterized protein

Link Out ? help Back to Top
Phytozome	DCAR_031668