PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

DCAR_031683

Organism

Daucus carota

Taxonomic ID

4039

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Apiales; Apiineae; Apiaceae; Apioideae; Scandiceae; Daucinae; Daucus

Family

GeBP

Protein Properties

Length: 275aa MW: 31076.4 Da PI: 6.7762

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
DCAR_031683	genome	ARS-USDA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	90.8	1.5e-28	74	169	3	98
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 ++ ++++eDei+l G+i+fk+++ ++ s++++af +fvk+s+s vs++qlv+Ki +LK+Kf +v+k+++g++p k+hd k fels+ iWgs DCAR_031683 74 IKAVFTKEDEIALVEGMIEFKETNQSNLSSNMTAFRNFVKNSLSCIVSRTQLVSKISKLKHKFLCNVSKVENGEDPMSWKPHDYKLFELSRDIWGS 169 6789******************************************************************************************95 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	2.7E-23	76	168	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence Send to blast
MAQPQYLPSS SSESERLVQE ISSESERLVQ EISSDDSGSD FESQQVTKTT CDNVSSALKK 60 PTLPLKPNAK PRAIKAVFTK EDEIALVEGM IEFKETNQSN LSSNMTAFRN FVKNSLSCIV 120 SRTQLVSKIS KLKHKFLCNV SKVENGEDPM SWKPHDYKLF ELSRDIWGSE VLGGMEKDSK 180 DDHVANKTEA KPKLWWSLYP CLCASLESEA NKNFRETILA KEYVNKVLRV LETKKAAELE 240 EEWNSFLVMQ QQVYAKRMKL IAKQAEAMMN SSSQ*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_017227785.1	0.0	PREDICTED: uncharacterized protein LOC108192218
TrEMBL	A0A175YBY7	0.0	A0A175YBY7_DAUCS; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	9e-16	DNA-binding storekeeper protein-related transcriptional regulator

Link Out ? help Back to Top
Phytozome	DCAR_031683