PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca10788.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bZIP
Protein Properties Length: 230aa    MW: 25442.6 Da    PI: 6.1505
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca10788.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.71.3e-13160205550
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                 k+  rk+kNRe+A rsR+RK+a+  eL  kv  Le++N++Lkke e
  Dca10788.1 160 KKLNRKIKNRESAARSRARKQAYHNELVSKVSCLEEQNMRLKKEQE 205
                 7788**************************************9965 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.1E-14151204No hitNo description
SMARTSM003381.2E-8155224IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.025158203IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.25E-10160206No hitNo description
PfamPF001703.9E-11160205IPR004827Basic-leucine zipper domain
CDDcd147072.59E-15164206No hitNo description
PROSITE patternPS000360164178IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MNNTMGSMNL EEFLKGCWTS ETNPNPNPNP SPSSGVETGT SEVVTTVKSL RHEGSLGISG  60
NFSEKISDEV WGEFQKGENV KASVAGGIKR EPSMGEMTLE DFLTKEGAID ECPLMPLDIG  120
VTSHCFSQQL GLSPPPSVSG MPDTPVSGSR RHPSDRGIEK KLNRKIKNRE SAARSRARKQ  180
AYHNELVSKV SCLEEQNMRL KKEQEMENCF FSELSDEPRF QLRRTSSAVF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010689370.15e-85PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6 isoform X4
TrEMBLA0A0J8BLW31e-83A0A0J8BLW3_BETVU; Uncharacterized protein
STRINGXP_010689366.12e-71(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.33e-33bZIP family protein