PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dca12567.1

Organism

Dianthus caryophyllus

Taxonomic ID

3570

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus

Family

BES1

Protein Properties

Length: 110aa MW: 11762.1 Da PI: 11.0482

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dca12567.1	genome	DCA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	169.8	1.5e-52	23	105	2	85
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagss 85 +++rkp+w+ErEnn+rRERrRRaiaaki++GLRaqGny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+k++ +e++ s Dca12567.1 23 SARRKPSWRERENNRRRERRRRAIAAKIFSGLRAQGNYNLPKHCDNNEVLKALCAEAGWIVEPDGTTYRKGMKRP-PPEIVASY 105 799**********************************************************************99.66665554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	4.4E-48	24	101	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 110 aa Download sequence Send to blast
MASEGASSGG GGGGGGGGGG ASSARRKPSW RERENNRRRE RRRRAIAAKI FSGLRAQGNY 60 NLPKHCDNNE VLKALCAEAG WIVEPDGTTY RKGMKRPPPE IVASYNNFSA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	4e-28	25	104	371	450	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	4e-28	25	104	371	450	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	4e-28	25	104	371	450	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	4e-28	25	104	371	450	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	43	RRKPSWRERENNRRRERRRR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021718688.1	5e-44	protein BRASSINAZOLE-RESISTANT 1-like
Swissprot	Q94A43	3e-30	BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBL	A0A0K9QG86	1e-40	A0A0K9QG86_SPIOL; Uncharacterized protein (Fragment)
STRING	XP_010684125.1	3e-43	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19350.6	2e-32	BES1 family protein