PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca14916.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bZIP
Protein Properties Length: 453aa    MW: 50594.8 Da    PI: 6.8864
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca14916.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.31.9e-09165194433
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 
                  k  rr+++NReAAr+sR RKka++++Le+
  Dca14916.1 165 QKTLRRLAQNREAARKSRMRKKAYVQQLEN 194
                 5888************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.7E-7158209No hitNo description
SMARTSM003386.7E-5162215IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.232164208IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.62E-6166206No hitNo description
PfamPF001702.0E-6166194IPR004827Basic-leucine zipper domain
PROSITE patternPS000360169184IPR004827Basic-leucine zipper domain
PfamPF141441.2E-28250324IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MHNFRDMYCH SSPYFLRGDD ITTKTRNNSN IGEFENSVVF HQQEAVDLST SSLYGLKSGN  60
VTFSSSLPFA TVNPGNYVGG EVVVDAGELL VEKRAAAVRN RRLDRWGEET TTAAAAAAAA  120
MADAGQHTDT STDVDTDDRN RYRIIQNGAD VVDSTDQSKG KNDDQKTLRR LAQNREAARK  180
SRMRKKAYVQ QLENSRLRLA HMERELEKAR QQGFIVSGSA TDAAHSLGSN GSVAFDTQYG  240
RWLDEHQRLI NDTRSALDSH MADDELRSLV DGVMCHYDDL YRLKNMGAKT DIFHMLSGMW  300
KTPAERCFMW LGGYRSSEIL KIVVSHLEPL TEQQLMGICN LQQSSQQAED ALSQGMEALQ  360
QSLVETLSAT CLGPGSTGMV ADYMGQMAIA MGKLGTLENF VHQADLLRQQ TLQQMHRILT  420
TRQAARALLV IHDYTTRLRA LSSLWLARPR NFS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010667846.10.0PREDICTED: transcription factor TGA2 isoform X1
SwissprotQ415581e-159HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0J8B2050.0A0A0J8B205_BETVU; Uncharacterized protein
STRINGXP_010667846.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-138bZIP family protein